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PLS-DA generic error landing page
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1
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11
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August 6, 2026
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Issues with RandomForest Analyses
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1
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14
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August 5, 2026
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Issues with group editing and normalization using ref feature in pathway analysis
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1
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17
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August 5, 2026
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Identical p-values from Classical test and Limma analysis for paired data
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4
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48
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August 3, 2026
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PCA 2D Scores Plot fails to load (404 error) — Scree Plot and 3D Scores Plot work fine
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3
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44
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July 27, 2026
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How exactly is the p-value cutoff in the Functional Analysis (Mummichog) module calculated/rounded?
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3
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40
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July 24, 2026
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KEGG analysis for a plant fermentation
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0
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32
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July 23, 2026
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Data filtering and NAs vs Zeros
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2
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32
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July 27, 2026
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"No gene hits!" error when using Daphnia pulex pathway library with UniProt or KEGG protein IDs
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6
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72
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July 20, 2026
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Batch Correction issues - even examples not eligible
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7
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131
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July 20, 2026
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3D PCA Not Working properly
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1
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29
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July 13, 2026
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Issue Generating Volcano Plots
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2
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63
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July 13, 2026
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Joint Pathway Analysis — C. elegans gene mapping returns no hits in MetaboAnalyst 6.0 (all ID types)"
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2
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32
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July 20, 2026
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Cannot replicate previous loadings results
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3
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49
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July 7, 2026
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ERROR 'x' must be an array of at least two dimensions
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1
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26
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July 6, 2026
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Issue with Blank Volcano Plot in MetaboAnalyst
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4
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94
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July 3, 2026
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Unable to impute missing values in statistical analysis (one factor)
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3
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66
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June 25, 2026
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Arabidopsis Joint Pathway Analysis does not recognize AT locus IDs
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0
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23
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June 25, 2026
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Cytidine 2':3'-cyclic monophosphate HMDB0011691 was used for GSSG HMDB000337 in the database?
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3
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44
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June 24, 2026
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Labelling problem while creating volcano plot
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6
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94
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June 23, 2026
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Error to retrieve the mmu.qs
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0
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27
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June 18, 2026
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How to perform Variance Partitioning Analysis (VPA) in MetaboAnalyst to compare GC-MS vs. widely-targeted metabolomes?
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1
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30
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June 13, 2026
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3D PCA/PLS-DA/oPLS-DA ellipses appear shifted when using metadata overlay
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0
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33
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June 11, 2026
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Volcano Plot output/saving not working
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1
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44
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June 9, 2026
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Limma (t-test and volcano plot)
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9
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168
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June 5, 2026
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Error in qs::qread(filenm) : QS format not detected
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1
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27
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June 5, 2026
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Principal Component Analysis (PCA)
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4
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102
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June 8, 2026
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Volcano plot ommiting the cicles for molecules
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0
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23
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June 1, 2026
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Volcano plot dot size different then legend
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2
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65
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June 8, 2026
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Cross validation method for OPLS-DA
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4
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89
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May 26, 2026
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