|
Is there a way to get the PC1 and PC2 loadings and/or the sample scores from the PCA Plots?
|
|
1
|
15
|
April 14, 2026
|
|
Cannot find an FDR option, but the adjusted p-value is there
|
|
0
|
12
|
January 14, 2026
|
|
P values the same in multiple comparisons?
|
|
4
|
119
|
September 13, 2025
|
|
Parametric vs Non-Parametric Analysis
|
|
3
|
145
|
August 18, 2025
|
|
Calculated BMDs are 0
|
|
0
|
164
|
May 26, 2025
|
|
Normalization fails - unable to proceed
|
|
3
|
298
|
December 23, 2024
|
|
Genes disappear/reappear based on impute mode chosen
|
|
0
|
246
|
December 4, 2024
|
|
Error on step of “Overview of Differentially Expressed (DE) Genes”
|
|
2
|
217
|
November 7, 2024
|
|
Error on step of Sample Descriptor Editor
|
|
8
|
348
|
October 18, 2024
|
|
Removed wells from gDNA contamination - data input
|
|
4
|
389
|
June 15, 2024
|
|
How should I format my input files?
|
|
2
|
938
|
August 2, 2023
|
|
How are missing values imputed for EcoToxChip?
|
|
0
|
924
|
June 9, 2022
|
|
Same adjusted p-value for most genes?
|
|
1
|
899
|
February 14, 2023
|
|
Housekeeping gene tagged despite being above 0.05
|
|
6
|
642
|
February 10, 2023
|
|
Gene annotation for ecotox module
|
|
2
|
636
|
April 30, 2023
|
|
Does the order of your file upload affect the DEGs?
|
|
1
|
724
|
November 23, 2022
|
|
How is the color of the EcoToxChip rectangle on the Sankey plot determined?
|
|
0
|
746
|
June 9, 2022
|
|
How were the EcoToxModules defined?
|
|
0
|
772
|
June 9, 2022
|
|
What algorithm is used for enrichment analysis?
|
|
0
|
814
|
June 9, 2022
|
|
What fold-change values are displayed in the visualizations?
|
|
0
|
639
|
June 9, 2022
|
|
What should I do if the QA/QC checks require inquiry?
|
|
0
|
639
|
June 9, 2022
|
|
How do I change the genes in the heatmap Focus View?
|
|
0
|
703
|
June 9, 2022
|
|
How should I detect and deal with potential outlier samples?
|
|
0
|
723
|
June 9, 2022
|
|
What types of data does EcoToxXplorer accept?
|
|
0
|
636
|
June 1, 2022
|
|
How should I choose a suitable normalization method?
|
|
0
|
990
|
June 9, 2022
|
|
Why are some genes removed from the data?
|
|
0
|
706
|
June 9, 2022
|
|
Is the data that I uploaded confidential?
|
|
0
|
639
|
June 9, 2022
|