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Is there a way to get the PC1 and PC2 loadings and/or the sample scores from the PCA Plots?
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1
|
18
|
April 14, 2026
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Cannot find an FDR option, but the adjusted p-value is there
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0
|
15
|
January 14, 2026
|
|
P values the same in multiple comparisons?
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4
|
126
|
September 13, 2025
|
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Parametric vs Non-Parametric Analysis
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3
|
166
|
August 18, 2025
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Calculated BMDs are 0
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0
|
166
|
May 26, 2025
|
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Normalization fails - unable to proceed
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3
|
306
|
December 23, 2024
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Genes disappear/reappear based on impute mode chosen
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0
|
253
|
December 4, 2024
|
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Error on step of “Overview of Differentially Expressed (DE) Genes”
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2
|
224
|
November 7, 2024
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|
Error on step of Sample Descriptor Editor
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|
8
|
371
|
October 18, 2024
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Removed wells from gDNA contamination - data input
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4
|
402
|
June 15, 2024
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How should I format my input files?
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2
|
949
|
August 2, 2023
|
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How are missing values imputed for EcoToxChip?
|
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0
|
929
|
June 9, 2022
|
|
Same adjusted p-value for most genes?
|
|
1
|
908
|
February 14, 2023
|
|
Housekeeping gene tagged despite being above 0.05
|
|
6
|
668
|
February 10, 2023
|
|
Gene annotation for ecotox module
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|
2
|
648
|
April 30, 2023
|
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Does the order of your file upload affect the DEGs?
|
|
1
|
729
|
November 23, 2022
|
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How is the color of the EcoToxChip rectangle on the Sankey plot determined?
|
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0
|
750
|
June 9, 2022
|
|
How were the EcoToxModules defined?
|
|
0
|
775
|
June 9, 2022
|
|
What algorithm is used for enrichment analysis?
|
|
0
|
815
|
June 9, 2022
|
|
What fold-change values are displayed in the visualizations?
|
|
0
|
643
|
June 9, 2022
|
|
What should I do if the QA/QC checks require inquiry?
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0
|
642
|
June 9, 2022
|
|
How do I change the genes in the heatmap Focus View?
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0
|
706
|
June 9, 2022
|
|
How should I detect and deal with potential outlier samples?
|
|
0
|
727
|
June 9, 2022
|
|
What types of data does EcoToxXplorer accept?
|
|
0
|
640
|
June 1, 2022
|
|
How should I choose a suitable normalization method?
|
|
0
|
994
|
June 9, 2022
|
|
Why are some genes removed from the data?
|
|
0
|
708
|
June 9, 2022
|
|
Is the data that I uploaded confidential?
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|
0
|
641
|
June 9, 2022
|