Error! You must have more than three non-zero dose groups for Exp5 and Hill models
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3
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169
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May 22, 2023
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Shading in gene level BMD figure
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1
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119
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April 12, 2023
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Data Filtering & Normalization - Inactive 'submit' button
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6
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153
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November 8, 2022
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How are pathway BMDs (pathBMDs) calculated?
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0
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177
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June 9, 2022
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Which gene set libraries are available for pathway BMD analysis?
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0
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170
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June 9, 2022
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Should I change the filters for the enrichment analysis results?
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0
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137
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June 9, 2022
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How is the gene set analysis done?
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0
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127
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June 9, 2022
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What is a transcriptomic POD (tPOD) and how is it calculated?
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0
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292
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June 9, 2022
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Why are there some genes with model fits but no BMDs?
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0
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149
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June 9, 2022
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How are the BMDl and BMDu calculated for each gene?
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0
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169
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June 9, 2022
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What is the BMR factor?
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0
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188
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June 9, 2022
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How is the best fit model selected for each gene?
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0
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181
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June 9, 2022
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What is a lack-of-fit p-value and which threshold should I choose?
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0
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139
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June 9, 2022
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Which statistical models should I select?
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0
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144
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June 9, 2022
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Where do the statistical models come from and what are their exact equations?
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0
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138
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June 9, 2022
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How are gene-level benchmark doses (BMDs) calculated?
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0
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169
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June 9, 2022
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What is the rationale behind filtering gene expression data in FastBMD?
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0
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158
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June 9, 2022
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What if my microarray platform or organism is not supported?
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0
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124
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June 9, 2022
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What is the minimum number of concentrations required for dose-response analysis?
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0
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133
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June 9, 2022
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Is the data that I uploaded kept confidential?
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0
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133
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June 9, 2022
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What do the colours on the pathway heatmaps represent?
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0
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209
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June 9, 2022
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What does gene-level summarization mean in FastBMD?
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0
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155
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June 9, 2022
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How do I detect and deal with potential outliers?
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0
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144
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June 9, 2022
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How should I choose a suitable normalization procedure for my data?
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0
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195
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June 9, 2022
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What are the different types of normalization?
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0
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960
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June 9, 2022
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How to label a gene expression table in FastBMD?
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0
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129
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June 9, 2022
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What types of data does FastBMD accept?
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0
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193
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June 1, 2022
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How to format a gene expression table?
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0
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185
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June 9, 2022
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