Hi,
This is a follow-up to my last question: How to do a Joint Pathway Analysis for Candida albicans multi-omics data?
Could you please let me know when I can expect the release of this updated feature?
Thanks.
It was released last Wednesday. Please take a look.
Likely you were re-directed to one of our backup nodes (running the previous version) at the peak time.
Please check your URL and make sure it is: https://www.metaboanalyst.ca/MetaboAnalyst/upload/PathUploadView.xhtml
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Thanks.
I tried with the new module. I used gene symbols and compound names as the input, and selected Candida albicans as the organism. I got the following error:
Can you help me out with this?
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Module used: Joint Pathway Analysis
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Data: 2 .csv files attached. Proteomics data: UniProt ID, Gene symbol (not available for all, as some Candida proteins are predicted/uncharacterised), Fold change; Metabolomics data: KEGG ID, Fold change
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Steps followed:
a. Opened the MetaboAnalyst 6.0 website and selected the Joint pathway analysis tool. Targeted (compound list) was selected from the dropdown menu.
b. In the two dialogue boxes given, first i pasted the list of uniprot IDs with the corresponding fold changes in the proteomics box, and the list of KEGG compound IDs with corresponding fold changes in the metabolomics box.
c. I selected C. albicans as the organism, and clicked on Proceed, getting the same error as before:
d. Since using uniprot IDs didn’t work, i tried the same process with gene symbols only to get the same error again.
Please look into this and help me out.
Thank you!
C.albicans_JointPathwayAnalysis_Metabolomics.csv (952 Bytes)
C.albicans_JointPathwayAnalysis_Proteomics.csv (2.3 KB)