I am having difficulty installing (or running) MetaboAnalystR. Could you please recommend a specific version to try and, most importantly, what kind of installation to perform? You can just point me to the appropriate instructions (for example, whether to install from GitHub or to clone and build from source).
I am not asking anyone to troubleshoot my installation; I would just like to know what worked for you (preferably on Ubuntu), and I will take it from there.
Running Ubuntu 24.04, R 4.5.2
Here some of the things I have tried but no success:
env::install(“xia-lab/MetaboAnalystR@v3.3.0”)env::install(“xia-lab/MetaboAnalystR@v4.2.0”)- Downloaded either version tar file from GitHub release
- Followed the instructions at MetaboAnalyst step 2/Option A I managed to install it, but got
[1] "Failed to connect to the API Server!" [1] "Failed to perform pathway analysis!"when I tried to run some pathway analysis.