PerformDIADeconvolution

MetaboAnalyst
1

Hi,

Has anyone performed PerformDIADeconvolution ? I am trying to do and it shows error with BicoParallel :

mSet ← PerformDIADeconvolution(mSet,

  •                             min_width = 5,

  •                             span = 0.3,

  •                             ppm2 = 30,

  •                             sn = 12,

  •                             filtering = 0,

  •                             ncores = 6L)

PerformDIAProcess Preparation starting…
Arguments configuration done!
PerformDIAProcess starting…
now, peak width min is -->5
Total number of MS1 features is 4496
2728 MS1 scans and 2021 MS2 scans are imported!
===== Start deconvolution. Progress shown below =====
…PerformDIAProcess Preparation starting…
Arguments configuration done!
PerformDIAProcess starting…
now, peak width min is -->5
Total number of MS1 features is 4496
2729 MS1 scans and 1699 MS2 scans are imported!
===== Start deconvolution. Progress shown below =====
…PerformDIAProcess Preparation starting…
Arguments configuration done!
PerformDIAProcess starting…
now, peak width min is -->5
Total number of MS1 features is 4496
2728 MS1 scans and 1854 MS2 scans are imported!
===== Start deconvolution. Progress shown below =====
…PerformDIAProcess Preparation starting…
Arguments configuration done!
PerformDIAProcess starting…
now, peak width min is -->5
Total number of MS1 features is 4496
2730 MS1 scans and 2012 MS2 scans are imported!
===== Start deconvolution. Progress shown below =====
…PerformDIAProcess Preparation starting…
Arguments configuration done!
PerformDIAProcess starting…
now, peak width min is -->5
Total number of MS1 features is 4496
2729 MS1 scans and 1696 MS2 scans are imported!
===== Start deconvolution. Progress shown below =====
…PerformDIAProcess Preparation starting…
Arguments configuration done!
PerformDIAProcess starting…
now, peak width min is -->5
Total number of MS1 features is 4496
2728 MS1 scans and 1742 MS2 scans are imported!
===== Start deconvolution. Progress shown below =====
…Error: BiocParallel errors
6 remote errors, element index: 1, 21, 41, 61, 81, 101
111 unevaluated and other errors
first remote error:
Error: Not compatible with requested type: [type=list; target=double].

I also trying stopping the multiple workers and reinitiated, still the same …