Dear all,
I’m running the spectra processing workflow, and I got the following error:
wd = /data/glassfish/projects/metaboanalyst/guest6967037828604514195project
Step 7/12: MS/MS data imported completely!
> mSet <- PerformDDADeconvolution(mSet,
+ ppm1 = 5.0, ppm2 = 10.0, sn = 12, filtering = 200.0, window_size = 1.5, intensity_thresh = 100000.0, database_path = '/home/glassfish/sqlite/MS2ID_Complete_v09102023.sqlite',
+ ncores = 4L, decoOn = TRUE, useEntropy = FALSE);
Loading required package: parallel
Error in if (ncores <= nPeaks) { : argument is of length zero
Calls: PerformDDADeconvolution
Execution halted
srun: error: xiaserver10: task 0: Exited with exit code 1
Any idea what the source of the problem is?
thanks