ProteoAnalyst is a comprehensive, web-based platform designed for the downstream statistical and functional analysis of proteomics data. It is designed for researchers who need to process, visualize, and interpret complex bottom-up, label-free proteomics data generated from modern LC-MS/MS platforms.
The tool currently supports common tasks:
- Data quality checks, filtering, normalization, missing value imputation
- Differential expression analysis,
- Enrichment analysis (GO, pathways, etc)
- PPI network analysis
- Weighted co-expression network analysis
- Biomarker analysis
The chart below summarizes the overall workflow of ProteoAnalyst
