I am OmicsNet to integrate proteomics with metabolomics that compares the differences between wild type mice and a disease model. One problem I am having is generating either files or printouts that retain all the labels. For data points that are small, the labels do not appear when the pathway network is very large.
I would like to see the names of the compounds that are in between the nodes in order to determine if they are in our data set but did not have a fold change above 1.5 or a significant p-value and so were left out of the omics analyses. Alternatively, is there a way for me to have the program print the names of the small compounds?
I would be grateful for any suggestions you may have.
Thank you!
Ellen