I’ve been using EOA to profile my RNAseq data for Japanese quail. The Kallsito output file gives me a strange reference ID for my sequences, for instance:
From what I understand the first part of the name is the chromosome ID and the 9 numbers after XP are the gene ID reference. The problem is that I want to use this data set in ecotoxXplorer but it cannot recognise the reference ID. In the past, the Kallisot output file from EOA gave ensembl ID name which was very easy to use with ecotoxXplorer. Would it be possible to have the same or another ref ID that would be directly usable in ecotoxXplorer.
Thanks for your help!