ERROR: Gene KO GO species map file is empty

ExpressAnalyst
1

Hi!

My ExpressAnalyst workflow crashes seconds after launching; the log file says: ‘ERROR: Gene KO GO species map file is empty’.

The files seem to load normally (powershell) and are checked to be good to go. I am working with a non-model nematode species, and downloaded the ‘nematodes’ database with 6 spp (for Seq2Fun). I used the default parameters for read mapping and quantification. I tried to modify the nb. of allowed AA mismatches, etc, but the result remains this error message:

ERROR: Gene KO GO species map file is empty.

Does anyone know where the problem is?

Thanks!

2

Hi Lulu,

We have figured out the reason of this issue. Please put the database files directly into the DATABASE folder without any subdirectories.

Bests,
Zhiqiang

3

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