Yes, MicrobiomeAnalyst allows users to color samples based on their alpha diversities or the abundance level of a feature of interest. To do so, users need to
- Select “Beta-diversity analysis” from the Analysis Overview.
- First select a taxonomic level (i.e. Genus), and select the feature of interest (i.e. g__Bacteroides), see below
- Click the “Update” button. An example output is given below. It is clear that the feature abundance is strongly associated with the patterns of sample distribution
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